Protecting YEWth: ancient and veteran yew trees as collections of genetic diversity through centuries
Defining baselines of genetic diversity is crucial to understand how genetic diversity has decreased in response to recent environmental changes, but baselines are seldom available. Ancient and veteran trees offer a unique opportunity for describing baseline levels of genetic diversity in a species, because their DNA predates the population declines that have affected species in more recent times. The English yew Taxus baccata L., is one of the most long-lived species in Britain, with ancient and veteran trees occurring in and outside woodlands. Habitat fragmentation throughout the native range of T. baccata has caused population declines, and the consequent loss of genetic diversity will likely have an impact on future population resilience. To understand how much genetic diversity has been lost in T. baccata, the PhD student will: (1) analyse differences in genetic diversity by age group in woodland populations, to understand whether low regeneration in woodlands is associated with lower genetic diversity in young trees; (2) analyse genetic differentiation between trees outside woodlands (TOWs), including ancient and veteran trees planted in churchyards, and trees in woodlands, to understand whether TOWs have tempered the isolation of native woodlands by contributing to gene flow; (3) describe genomic diversity in ancient and veteran trees, to define baseline levels of genetic diversity for the species, and compare this baseline with genome-wide diversity in younger trees.
One-to-one instruction by supervisory team: conservation genetics and genomics, molecular methods (laboratory based), bioinformatics applied to genomics, tree age estimation (through the Ancient Yew Group).
Training via external partners as appropriate. All training available at the Royal Botanic Gardens, Kew: Research ethics and integrity, Writing for a Range of Audiences, Presentation Skills and others.
The PhD student will learn transferable skills such as molecular analyses, bioinformatic and data processing, and communicate to a range of stakeholders outside research, for example conservation practitioners and local communities interested in the cultural value of yew trees. The PhD student will be encouraged to select training opportunities depending on their interests. Potential career trajectories might be (1) pursuing a career in academia and research, building on the scientific and technical knowledge the student will acquire during the PhD; (2) pursuing a career in conservation practice and policy, also building on the strong conservation focus of this project and its cultural and ethnobotanical component.